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Location: Home > Custom Services > Molecular Biology Services > RNA pull down Assay

RNA pull down Assay

Date: 2018-01-24 Author: Leading Biology Click: 1739

Introduction

RNA pull-down assay is a technique used to detect the RNA-protein interactions using immunoprecipitation (IP). This technique is commonly used to either confirm the presence of a scant protein or enrich the population of a particular protein, as well as to identify natural binding partners for the captured protein. 



RNA pull down Assay


Biotinylated RNA-pulldown is a useful pulldown Method which theoretically works for all RNA-binding proteins (RBPs), as this assay is performed in a cell-free system. The first step of this method is to synthesis RNAs of interest in the presence of biotinylated cytidine triphosphate (CTP); the RNA then incubated with a cell-free system to allow RBPs to recognize RNA regions to which it has an affinity, while other regions won’t interact with RBPs. After binding complete, the biotinylate tagged RNA is pulled down using streptavidin-coated beads and the RBPs are typically detected by Western blot analysis. 


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